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Bioinformatics News 12/2008

Born to Run' Little Ones Get Test for Sports Gene (The Sarasota Herald-Tribune)
A genetics company is offering a $149 test that aims to predict a childs natural athletic strengths.

Cell Movements Totally Modular, Stanford Study Shows (Science Daily)
A study describing how cells within blood vessel walls move en masse overturns an assumption common in the age of genomics -- that the proteins driving cell behavior are doing so much multitasking that it would be near impossible to group them according to a few discrete functions. But now researchers have shown that distinct groups of proteins each control one of four simple activities involved ...

Science partnership comes together under one roof (Scoop.co.nz)
Scientific teams from AgResearch and the University of Otago will soon come together under one roof, in the new Centre for Reproduction and Genomics (CRG) at AgResearch’s Invermay campus near Dunedin.

New technology cuts cost and time for DNA work (BizJournals)
The $800 million market for microarray equipment may take a hit as next-generation DNA sequencing platforms gain popularity.

Born to Run' Little Ones Get Test for Sports Gene (The Hendersonville Times-News)
A genetics company is offering a $149 test that aims to predict a childs natural athletic strengths.

Napolitano exit worries biotech, climate-change, education boosters (Tucson Citizen)
Gov. Janet Napolitano's selection for a job in Washington, D.C., may be secure, but her vision of a research-based economy in Arizona is no sure thing.

Elsevier's EMBASE.com Partners With QUOSA (PR Newswire via Yahoo! Finance)
EMBASE®, Elsevier's biomedical and pharmaceutical abstract and indexing database, today announced that it has partnered with QUOSA to enable mutual customers to download and manage the full text of EMBASE.com search results via a newly established EMBASE.com channel in QUOSA Information Manager.

Elsevier's EMBASE.com Partners With QUOSA (PR Newswire via Yahoo! Finance)
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Genetic variation in metabolism identified (News-Medical-Net)
Metabolic diseases - in particular the increasingly prevalent type 2 diabetes - are caused by a complex interaction between genetic disposition and unfavorable lifestyle, above all unbalanced diet and too little physical exercise.

Science, Notes & News (Louisville Courier-Journal)
GENEVA -- Fixing the world's largest atom smasher will cost at least 25 million francs ($21 million) and may take until early summer, its operator said Monday.

Research Advance May Lead To New Ways To Attack Latent TB And Other Bacteria (Medical News Today)
An international team of biochemists has discovered how an experimental drug unleashes its destructive force inside the bacteria that cause tuberculosis (TB). The finding could help scientists develop ways to treat dormant TB infections, and suggests a strategy for drug development against other bacteria as well. A report describing the research, led by Clifton E. Barry, III, Ph.D.

Cell movements totally modular, study shows (PhysOrg)
A study describing how cells within blood vessel walls move en masse overturns an assumption common in the age of genomics — that the proteins driving cell behavior are doing so much multitasking that it would be near impossible to group them according to a few discrete functions.

Napolitano exit worries biotech, climate-change, education boosters (Tucson Citizen)
Gov. Janet Napolitano's selection for a job in Washington, D.C., may be secure, but her vision of a research-based economy in Arizona is no sure thing.

Researchers Use Affymetrix Technology to Discover Why Some Breast Cancer Patients Resist Tamoxifen (Business Wire via Yahoo! Finance)
SANTA CLARA, Calif.----Affymetrix Inc., announced today that scientists at Cancer Research UK have used Affymetrix technology to discover the molecular basis for tamoxifen response in breast cancer cells - and the reason why some women can develop resistance to the treatment.

Researchers Use Affymetrix Technology to Discover Why Some Breast Cancer Patients Resist Tamoxifen (Centre Daily Times)
Affymetrix Inc., (Nasdaq:AFFX) announced today that scientists at Cancer Research UK have used Affymetrix technology to discover the molecular basis for tamoxifen response in breast cancer cells - and the reason why some women can develop resistance to the treatment. Their findings are published in Nature 1 .

Compilers/Development Tools suit multicore x64 processors. (ThomasNet)
PGI® Release 8.0 supports OpenMP 3.0 multicore parallel programming standard in Fortran and C across Linux/Mac OS X/Windows. It enables automatic offloading of parallel computations from x64 host processors to CUDA-enabled GPUs and analyzes source code automatically, listing possible or inhibited performance changes. Data is presented through Common Compiler Feedback Format. Program supports ...

New Zealand's AgResearch, Otago University to Share Reproduction and Genomics Center (GenomeWeb News)
GenomeWeb Daily News You are not logged in. Existing subscribers login here . New to GenomeWeb Daily News? Register quickly here for your free subscription.

Insights Into Adaptive Ability Of Cells May Help Explain How Cancer Eludes Body's Natural Defense (Science Daily)
Scientists have shed light on the ability of cells to adapt to disruptions to their basic division machineries -- a finding that may help explain how cancer cells elude the body's natural defense mechanisms or chemotherapy treatment.

Tool helps identify gene function in soybeans (EurekAlert!)
( University of Missouri-Columbia ) University of Missouri Interdisciplinary Plant Group researchers have demonstrated the applicability of a genomic tool for identifying gene function in soybeans. Understanding gene function in soybeans will ultimately benefit crop performance.

Positive EFSA opinion on Pioneer's 59122xNK603 maize for import, food and feed use - EU proposal for approval to be ... (SeedQuest)
The GMO Panel of the European Food Safety Authority (EFSA) has today published the positive scientific safety assessment of stacked maize product 59122xNK603 for import, food and feed use, concluding it to be as safe as conventional maize.

Scientific Opinion of the Panel on Genetically Modified Organisms on application (Reference EFSA-GMO-UK-2005-20) for ... (SeedQuest)
Following a request from Pioneer Hi-Bred International within the framework of Regulation (EC) No 1829/2003 on genetically modified food and feed (EC, 2003) for food and feed uses, import and processing, the Panel on Genetically Modified Organisms was asked to deliver a scientific opinion on the authorisation of the insect-resistant, glyphosate- and glufosinate-tolerant genetically modified ...

UC Riverside rice geneticist receives high honor from US Department of Agriculture (EurekAlert!)
( University of California - Riverside ) Julia Bailey-Serres, a professor of genetics at the University of California, Riverside, is the lead recipient of the 2008 USDA National Research Initiative Discovery Award. She has been the principle investigator on three USDA-funded projects that led to the identification and characterization of genes in rice that are responsible for flood tolerance. ...

My Web Doesn't Like Your Enterprise, at Least While it's More Fun (O'Reilly Media)
The other day Jesse posted a call for participation for the next Velocity Web Operations Conference. My background is in the enterprise space, so, despite Velocity's web focus, I wondered if there might not be interest in a bit of enterprise participation. After all, enterprise data centers deal with the same "Fast, Scaleable, Efficient, and Available" imperatives. I figured there...

Study: Cell movements are totally modular (UPI)
STANFORD, Calif., Dec. 1 (UPI) -- U.S. medical scientists say they've found distinct groups of proteins that each control one of four simple activities involved in cells' collective migration.

Study: Cell movements are totally modular (Moldova.org)
U.S. medical scientists say they've found distinct groups of proteins that each control one of four simple activities involved in cells' collective migration.Stanford University School of Medicine researchers said their findings detailing how cells within blood vessel walls move en masse overturn an assumption common in the age of genomics -- that the proteins driving cell behavior are doing so ...

BioInformatics, LLC Studies Effective Strategies for Scientific Publishing in a Web 2.0 World (PR Newswire via Yahoo! Finance)
BioInformatics, LLC -- the leading market research and consulting firm serving the life science industry -- announces the publication of its latest report, "The Brave New World of Scientific Publishing."

Harvard Medical School to Use High Throughput Genomics' qNPA Technology (GenomeWeb News)
GenomeWeb Daily News You are not logged in. Existing subscribers login here . New to GenomeWeb Daily News? Register quickly here for your free subscription.

Powerful online tool for protein analysis provided pro bono by Stanford geneticist (EurekAlert!)
( Stanford University Medical Center ) Scientists around the world may benefit from a powerful new database, available for free online, that will help them to hone in on the parts of proteins most necessary for their function. Arend Sidow, Ph.D., associate professor of pathology and of genetics at the Stanford University School of Medicine, recently launched the novel bioinformatics tool, which ...

Tech out to crack genetic code of turkeys (Dothan Eagle)
Virginia Tech, whose teams are known as the Fighting Gobblers, is leading a consortium trying to determine the genetic sequence of that Thanksgiving Day staple — the domestic turkey.

Powerful online tool for protein analysis provided pro bono by Stanford geneticist (PhysOrg)
Scientists around the world may benefit from a powerful new database, available for free online, that will help them to home in on the parts of proteins most necessary for their function.

Escape Cancer, but Age Sooner? Scientists Unravel the Dark Side of the Tumor Suppressing Process (Newswise)
Cells shut down and stop dividing when their DNA is damaged, providing protection against cancer. However, a new study has found these cells also spew proteins into the cells' surrounding environment. The process, called cellular senescence, causes inflammation and sets up conditions that support the development of age-related diseases including, ironically, cancer.

Viral DNA in bacterial genome could hold key to novel cystic fibrosis treatments (EurekAlert!)
( Cold Spring Harbor Laboratory ) The bacterium Pseudomonas aeruginosa is well known for its environmental versatility, ability to cause infection in humans, and antibiotic resistance. P. aeruginosa is the most common cause of lung infections in cystic fibrosis patients. In a study published online today in Genome Research, researchers have used genomic techniques to study a particularly ...

Tool helps identify gene function in soybeans, could lead to better crop performance, say University of Missouri ... (SeedQuest)
In the race for bioengineered crops, sequencing the genome could be considered the first leg in a multi-leg relay. Once the sequence is complete, the baton is passed forward to researchers to identify genes’ functions.

AnaSpec Introduces Fluorescent Calcium Indicators (PR.com)
Calcium plays a vital role in the regulation of cardiac contractility, growth and gene expression; consequently, calcium measurement is critical in numerous biological investigations. Fluorescent probes that show spectral responses upon Ca2+ binding have enabled researchers to investigate changes in intracellular free Ca2+ concentrations using techniques such as fluorescence microscopy, flow ...

InforSense Partners With the U.K.'s South London and Maudsley NHS Foundation Trust and King's College London to Combat ... (Marketwire via Yahoo! Finance)
InforSense Ltd., the leading provider of next generation business and scientific intelligence tools, today announced that the National Institute for Health Research (NIHR) Biomedical Research Centre for Mental Health at the South London and Maudsley National Health Service Foundation Trust and Institute of Psychiatry, King's College London will use InforSense's translational research tools in ...

Cell Movements Totally Modular, Stanford Study Shows (BioresearchOnline)
A study describing how cells within blood vessel walls move en masse overturns an assumption common in the age of genomics-that the proteins driving cell behavior are doing so much multitasking that it would be near impossible to group them according to a few discrete functions. But now researchers at the Stanford University School of Medicine have shown that distinct groups of proteins each ...

House Ear Institute, TGen and Belgian researchers identify gene in age-related hearing loss (EurekAlert!)
( The Translational Genomics Research Institute ) Researchers discovered a common variant in the GRM7 gene, which they believe may be associated with susceptibility to glutamate excitotoxicity and hearing loss.

/C O R R E C T I O N -- Rosetta Genomics Ltd/ (PR Newswire via Yahoo! Finance)
In the news release, "Rosetta Genomics Announces Conference Call and Webcast of Third Quarter Financial Results" issued on 26 Nov 2008 21:30 GMT, by Rosetta Genomics Ltd over PR Newswire, we are advised by a representative of the company that the time of the conference call should read 08:00 a.m.

Cell Movements Totally Modular, Stanford Study Shows (Medical News Today)
A study describing how cells within blood vessel walls move en masse overturns an assumption common in the age of genomics - that the proteins driving cell behavior are doing so much multitasking that it would be near impossible to group them according to a few discrete functions.

The Burnham Institute for Medical Research Becomes a GeneGo Center of Excellence Using MetaCore for Stem Cell Research ... (PR Newswire via Yahoo! Finance)
GeneGo, Inc., the leading systems biology tools company, announced today that Burnham has become a certified GeneGo Center of Excellence. Burnham researchers will have institution-wide access to GeneGo's MetaCore data analysis suite, training and advanced support.

/C O R R E C T I O N -- Rosetta Genomics Ltd/ (PR Newswire via Yahoo! Finance)
In the news release, "Rosetta Genomics Announces Conference Call and

Powerful Online Tool For Protein Analysis Provided Pro Bono By Stanford Geneticist (Medical News Today)
Scientists around the world may benefit from a powerful new database, available for free online, that will help them to home in on the parts of proteins most necessary for their function.

Learn about the Biophotonics: a Strategic Assessment of Photonics Technologies for Biomedical Applications, 2nd Edition (Business Wire via Yahoo! Finance)
NEW YORK----Reportlinker.com announces that a new market research report related to the Medical devices industry is available in its catalogue.

Learn about the US Biochips Market (Business Wire via Yahoo! Finance)
NEW YORK----Reportlinker.com announces that a new market research report related to the Biotechnologies and Genetics industry is available in its catalogue.

A human approach to computer processing (EurekAlert!)
( University of Nottingham ) A more human approach to processing raw data could change the way that computers deal with information, according to academics at the University of Nottingham.

Cold Spring Harbor Protocols features tissue culture methods for immune cells and neurons (EurekAlert!)
( Cold Spring Harbor Laboratory ) This month's issue of "Cold Spring Harbor Protocols" features two articles detailing experimental culture methods for cells from the immune system and the nervous system.

Deputy PM hails int’l scientific cooperation for people’s health (Vietnam Net)
VietNamNet Bridge - At the 8th International Society on Toxicology Asia-Pacific (IST-AP) Meeting opened Tuesday, Deputy PM Nguyen Thien Nhan asserted that the event is a good chance for both Vietnamese and foreign scientists to share their experience for the top priority – saving and improving people’s health.

Research and Markets: A Pathway Analysis for Drug Discovery: Save Time and Money in the Drug Discovery Process by ... (Business Wire via Yahoo! Finance)
DUBLIN, Ireland----Research and Markets has announced the addition of John Wiley and Sons Ltd's new report "Pathway Analysis for Drug Discovery: Computational Infrastructure and Applications" to their offering.

Research and Markets: A Pathway Analysis for Drug Discovery: Save Time and Money in the Drug Discovery Process by ... (Centre Daily Times)
Research and Markets ( http://www.researchandmarkets. ) has announced the addition of John Wiley and Sons Ltd's new report " Pathway Analysis for Drug Discovery: Computational Infrastructure and Applications " to their offering.

Basketball: Everton Tigers claw their way back to keep cup final hopes alive (Guardian Unlimited)
Everton Tigers produced a stunning last five minutes against Newcastle to give themselves a chance in the second leg


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